Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs72625107 | chr15:24521339 | G/C | 8.91E-5 | 206 | 17.02 | 14.32 | 10.63 | KM Plot |
| KIRP | rs72625109 | chr15:24524419 | C/T | 9.08E-5 | 202 | 17.52 | 14.32 | 10.63 | KM Plot |
| KIRP | rs72625111 | chr15:24528472 | T/C | 0.00011 | 212 | 17.03 | 14.03 | 10.23 | KM Plot |
| KIRP | rs72625112 | chr15:24546078 | G/A | 3.07E-5 | 210 | 18 | 13.78 | 10.23 | KM Plot |
| KIRP | rs72625113 | chr15:24546867 | G/C | 3.24E-5 | 211 | 17.52 | 14.03 | 10.23 | KM Plot |
| KIRP | rs72652014 | chr13:110660692 | A/G | 7.53E-10 | 208 | 15.88 | 18 | 10.23 | KM Plot |
| KIRP | rs72676124 | chr1:63804073 | C/T | 3.74E-6 | 208 | 14.1 | 18.95 | 8.03 | KM Plot |
| KIRP | rs72684368 | chr14:23720455 | C/G | 0.000601 | 209 | 14.83 | 18.03 | 17.13 | KM Plot |
| KIRP | rs72684370 | chr14:23721058 | T/C | 0.000277 | 210 | 14.85 | 17.62 | 16.83 | KM Plot |
| KIRP | rs72684372 | chr14:23722771 | T/C | 5.84E-5 | 208 | 14.87 | 18.25 | 16.53 | KM Plot |
| KIRP | rs72684373 | chr14:23722840 | T/C | 5.84E-5 | 208 | 14.87 | 18.25 | 16.53 | KM Plot |
| KIRP | rs72684374 | chr14:23723251 | G/A | 5.84E-5 | 208 | 14.87 | 18.25 | 16.53 | KM Plot |
| KIRP | rs72684376 | chr14:23726030 | A/G | 5.77E-5 | 208 | 15.65 | 18.03 | 16.53 | KM Plot |
| KIRP | rs72684381 | chr14:23727277 | G/T | 5.77E-5 | 208 | 15.65 | 18.03 | 16.53 | KM Plot |
| KIRP | rs72689328 | chr15:24797068 | A/G | 7.05E-7 | 213 | 15.88 | 17.87 | 9.77 | KM Plot |